Protein Structure

Proteins have at least three structures: primary, secondary, and tertiary structure.

The primary structure of a protein is its polypeptide sequence. The secondary structure consists of the coil (alpha-helix) and folds (beta-sheet) that result from hydrogen bonds between repeating constituents of the polypeptide chains. The tertiary structure is the overall shape of the polypeptide resulting from all the interactions between the side chains of various amino acids. A quaternary structure also arises when a protein consists of two or more polypeptide chains (Figure 1).

Three different illustrations based on the structure of the protein. In the first illustration, the primary structure of a protein is depicted with a chain of colored balls labelled with three letter codes for different amino acids. The balls link together and get smaller until they get into a helix-like structure, referred to as alpha-helix. The coil is linked with a string to two flat blue arrows, referred to as beta-sheets, which are the two types of secondary structure conformation of proteins.  The second illustration consists of an intricate structure of 8 overlapping beta-sheets and two alpha-helix all linked via strings. This structure is labelled tertiary structure for three-dimensional structure. The final illustration shows a  structure containing four thickly folded tubes bonded together labelled quaternary structure for complex of protein molecules

Figure 1: The various structures formed by amino acids and proteins are given specific terms. The primary structure refers to the linear amino acid sequence. The secondary structure refers to the formation of regular substructures such as alpha helices or beta sheets. The tertiary structure describes the 3D structure of the protein, accounting for the way the substructures interact with each other. Finally, if a protein is comprised of multiple polypeptides, their interaction is described in the quaternary structure.