Substrate

A substrate is a molecule upon which an enzyme acts. If we think of the enzyme as a machine in an assembly line, the substrate would be what we put into the machine to get the output we want.

The substrate for alcohol dehydrogenase (ADH), the enzyme we are working within this case, is ethanol; however, ADH can also bind other substrates with a similar structure such as methanol. Similar to the way ethanol is converted to acetaldehyde, methanol is converted to formaldehyde by ADH. Formaldehyde is a very toxic compound; smaller amounts of methanol may lead to blindness, while larger amounts are lethal. Thus, alcohol dehydrogenase is an example of a less specific enzyme with an affinity for several substrates. Some enzymes, as we mentioned earlier, are very specific and will only catalyze 1 reaction, whereas others, such as ADH, are more flexible.

On the chemical structure of ethanol, the hydrogen atoms are colored gray, the carbon atoms are colored black and the oxygen atom is colored red. Looking at the structure from the left side, three gray hydrogen atoms are connected to a black carbon atom, which is then connected to another carbon atom that has two hydrogen atoms connected to it. From this second carbon atom, an oxygen atom is also connected, which is connected to another hydrogen atom.

Figure 1: The chemical structure of ethanol, CH3CH2OH. C H three C H two O H. Hydrogen atoms are represented as gray spheres, carbons as black spheres, and oxygen atoms as red spheres.